Team

2013

Journal Article

Barker, A. J.; Baier, H.: SINs and SOMs: Neural microcircuits for size tuning in the zebrafish and mouse visual pathway. Frontiers in Neural Circuits 7, 89 (2013)

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Journal Article

Gebhardt, C.; Baier, H.; Del Bene, F.: Direction selectivity in the visual system of the zebrafish larva. Frontiers in Neural Circuits 7, 111 (2013)

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Full

Journal Article

Muto, A.; Taylor, M. R.; Suzawa, M.; Korenbrot, J. I.; Baier, H.: Glucocorticoid receptor activity regulates light adaptation in the zebrafish retina. Frontiers in Neural Circuits 7, 145 (2013)

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Journal Article

Robles, E.; Filosa, A.; Baier, H.: Precise lamination of retinal axons generates multiple parallel input pathways in the tectum. The Journal of Neuroscience 33 (11), pp. 5027 - 5039 (2013)

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Journal Article

Yahyavi, M.; Abouzeid, H.; Gawdat, G.; de Preux, A.-S.; Xiao, T.; Bardakjian, T.; Schneider, A.; Choi, A.; Jorgenson, E.; Baier, H. et al.; El Sada, M.; Schorderet, D. F.; Slavotinek, A. M.: ALDH1A3 loss of function causes bilateral anophthalmia/microphthalmia and hypoplasia of the optic nerve and optic chiasm. Human Molecular Genetics 22 (16), pp. 3250 - 3258 (2013)

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Journal Article

Ziv, L.; Muto, A.; Schoonheim, P. J.; Meijsing, S. H.; Strasser, D.; Ingraham, H. A.; Schaaf, M. J. M.; Yamamoto, K. R.; Baier, H.: An affective disorder in zebrafish with mutation of the glucocorticoid receptor. Molecular Psychiatry 18, pp. 681 - 691 (2013)

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2012

Journal Article

Akerboom, J.; Chen, T. W.; Wardill, T. J.; Tian, L.; Marvin, J. S.; Mutlu, S.; Calderon, N. C.; Esposti, F.; Borghuis, B. G.; Sun, X. R. et al.; Gordus, A.; Orger, M. B.; Portugues, R.; Engert, F.; Macklin, J. J.; Filosa, A.; Aggarwal, A.; Kerr, R. A.; Takagi, R.; Kracun, S.; Shigetomi, E.; Khakh, B. S.; Baier, H.; Lagnado, L.; Wang, S. S. H.; Bargmann, C. I.; Kimmel, B. E.; Jayaraman, V.; Svoboda, K.; Kim, D. S.; Schreiter, E. R.; Looger, L. L.: Optimization of a GCaMP calcium indicator for neural activity imaging. The Journal of Neuroscience 32 (40), pp. 13819 - 13840 (2012)

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Journal Article

Griffiths, B. B.; Schoonheim, P. J.; Ziv, L.; Voelker, L.; Baier, H.; Gahtan, E.: A zebrafish model of glucocorticoid resistance shows serotonergic modulation of the stress response. Frontiers in Behavioral Neuroscience 6, 68 (2012)

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Journal Article

Robles, E.; Baier, H.: Assembly of synaptic laminae by axon guidance molecules. Current Opinion in Neurobiology 22 (5), pp. 799 - 804 (2012)

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Journal Article

Warp, E.; Agarwal, G.; Wyart, C.; Friedmann, D.; Oldfield, C. S.; Conner, A.; Del Bene, F.; Arrenberg, A. B.; Baier, H.; Isacoff, E. Y.: Emergence of patterned activity in the developing zebrafish spinal cord. Current Biology 22 (2), pp. 93 - 102 (2012)

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2011

Journal Article

Miri, A.; Daie, K.; Arrenberg, A. B.; Baier, H.; Aksay, E.; Tank, D. W.: Spatial gradients and multidimensional dynamics in a neural integrator circuit. Nature Neuroscience 14 (9), pp. 1150 - 1157 (2011)

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Journal Article

Nevin, L. M.; Xiao, T.; Staub, W.; Baier, H.: Topoisomerase IIβ is required for lamina-specific targeting of retinal ganglion cell axons and dendrites. Development 138 (12), pp. 2457 - 2465 (2011)

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Journal Article

Robles, E.; Smith, S. J.; Baier, H.: Characterization of genetically targeted neuron types in the zebrafish optic tectum. Frontiers in Neural Circuits 5, 1 (2011)

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Journal Article

Xiao, T.; Staub, W.; Robles, E.; Gosse, N. J.; Cole, G. J.; Baier, H.: Assembly of lamina-specific neuronal connections by slit bound to type IV collagen. Cell 146 (1), pp. 164 - 176 (2011)

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2010

Journal Article

Arrenberg, A. B.; Stainier, D. Y. R.; Baier, H.; Huisken, J.: Optogenetic control of cardiac function. Science 330 (6006), pp. 971 - 974 (2010)

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Journal Article

Chao, R.; Nevin, L.; Agarwal, P.; Riemer, J.; Bai, X. Y.; Delaney, A.; Akana, M.; JimenezLopez, N.; Bardakjian, T.; Schneider, A. et al.; Chassaing, N.; Schorderet, D. F.; FitzPatrick, D.; Kwok, P. Y.; Ellgaard, L.; Gould, D. B.; Zhang, Y.; Malicki, J.; Baier, H.; Slavotinek, A.: A male with unilateral microphthalmia reveals a role for TMX3 in eye development. PLoS One 5 (5), e10565 (2010)

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Journal Article

Del Bene, F.; Wyart, C.; Robles, E.; Tran, A.; Looger, L.; Scott, E. K.; Isacoff, E. Y.; Baier, H.: Filtering of visual information in the tectum by an identified neural circuit. Science 330 (6004), pp. 669 - 673 (2010)

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Journal Article

Huberman, A. D.; Clandinin, T. R.; Baier, H.: Molecular and cellular mechanisms of lamina-specific axon targeting. Cold Spring Harbor Perspectives in Biology 2 (3), a001743 (2010)

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Journal Article

Nevin, L. M.; Robles, E.; Baier, H.; Scott, E. K.: Focusing on optic tectum circuitry through the lens of genetics. BMC Cell Biology 8, 126 (2010)

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Journal Article

Schoonheim, P. J.; Arrenberg, A. B.; Del Bene, F.; Baier, H.: Optogenetic localization and genetic perturbation of saccade-generating neurons in zebrafish. The Journal of Neuroscience 30 (20), pp. 7111 - 7120 (2010)

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2009

Journal Article

Arrenberg, A. B.; Del Bene, F.; Baier, H.: Optical control of zebrafish behavior with halorhodopsin. Proceedings of the National Academy of Sciences of the United States of America 106 (42), pp. 17968 - 17973 (2009)

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Journal Article

Baier, H.; Scott, E. K.: Genetic and optical targeting of neural circuits and behavior - zebrafish in the spotlight. Current Opinion in Neurobiology 19 (5), pp. 553 - 560 (2009)

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Journal Article

Gosse, N. J.; Baier, H.: An essential role for Radar (Gdf6a) in inducing dorsal fate in the zebrafish retina. Proceedings of the National Academy of Sciences of the United States of America 106 (7), pp. 2236 - 2241 (2009)

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Journal Article

Kurrasch, D. M.; Nevin, L. M.; Wong, J. S.; Baier, H.; Ingraham, H. A.: Neuroendocrine transcriptional programs adapt dynamically to the supply and demand for neuropeptides as revealed in NSF mutant zebrafish. Neural Development 4, 22 (2009)

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Journal Article

Maddison, L. A.; Lu, J. J.; Victoroff, T.; Scott, E.; Baier, H.; Chen, W. B.: A gain-of-function screen in zebrafish identifies a guanylate cyclase with a role in neuronal degeneration. Molecular Genetics and Genomics 281 (5), pp. 551 - 563 (2009)

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Journal Article

Scott, E. K.; Baier, H.: The cellular architecture of the larval zebrafish tectum, as revealed by Gal4 enhancer trap lines. Frontiers in Neural Circuits 3, 13 (2009)

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Journal Article

Seipold, S.; Priller, F. C.; Goldsmith, P.; Harris, W. A.; Baier, H.; Abdelilah-Seyfried, S.: Non-SMC condensin I complex proteins control chromosome segregation and survival of proliferating cells in the zebrafish neural retina. BMC Developmental Biology 9, 40 (2009)

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Journal Article

Wyart, C.; Del Bene, F.; Warp, E.; Scott, E. K.; Trauner, D.; Baier, H.; Isacoff, E. Y.: Optogenetic dissection of a behavioural module in the vertebrate spinal cord. Nature 461 (7262), pp. 407 - 410 (2009)

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2008

Journal Article

Chi, N. C.; Shaw, R. M.; Jungblut, B.; Huisken, J.; Ferrer, T.; Arnaout, R.; Scott, I.; Beis, D.; Xiao, T.; Baier, H. et al.; Jan, L. Y.; Tristani-Firouzi, M.; Stainier, D. Y. R.: Genetic and physiologic dissection of the vertebrate cardiac conduction system. PLoS Biology 6 (5), pp. 1006 - 1019 (2008)

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Journal Article

Del Bene, F.; Wehman, A. M.; Link, B. A.; Baier, H.: Regulation of neurogenesis by interkinetic nuclear migration through an apical-basal Notch gradient. Cell 134 (6), pp. 1055 - 1065 (2008)

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Journal Article

Gosse, N. J.; Nevin, L. M.; Baier, H.: Retinotopic order in the absence of axon competition. Nature 452 (7189), pp. 892 - 895 (2008)

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Journal Article

Nevin, L. M.; Taylor, M. R.; Baier, H.: Hardwiring of fine synaptic layers in the zebrafish visual pathway. Neural Development 3, 36 (2008)

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Journal Article

Sumbre, G.; Muto, A.; Baier, H.; Poo, M. M.: Entrained rhythmic activities of neuronal ensembles as perceptual memory of time interval. Nature 456 (7218), pp. 102 - 106 (2008)

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2007

Journal Article

Campbell, D. S.; Stringham, S. A.; Timm, A.; Xiao, T.; Law, M. Y.; Baier, H.; Nonet, M. L.; Chien, C. B.: Slit1a inhibits retinal ganglion cell arborization and synaptogenesis via Robo2-dependent and -independent pathways. Neuron 55 (2), pp. 231 - 245 (2007)

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Journal Article

Davison, J. M.; Akitake, C. M.; Goll, M. G.; Rhee, J. M.; Gosse, N.; Baier, H.; Halpern, M. E.; Leach, S. D.; Parsons, M. J.: Transactivation from Gal4-VP16 transgenic insertions for tissue-specific cell labeling and ablation in zebrafish. Developmental Biology 304 (2), pp. 811 - 824 (2007)

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Journal Article

Del Bene, F.; Ettwiller, L.; Skowronska-Krawczyk, D.; Baier, H.; Matter, J. M.; Birney, E.; Wittbrodt, J.: In vivo validation of a computationally predicted conserved Ath5 target gene set. PLoS Genetics 3 (9), pp. 1661 - 1671 (2007)

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Journal Article

Jin, S. W.; Herzog, W.; Santoro, M. M.; Mitchell, T. S.; Frantsve, J.; Jungblut, B.; Beis, D.; Scott, I. C.; D'Amico, L. A.; Ober, E. A. et al.; Verkade, H.; Field, H. A.; Chi, N. C.; Wehman, A. M.; Baier, H.; Stainier, D. Y. R.: A transgene-assisted genetic screen identifies essential regulators of vascular development in vertebrate embryos. Developmental Biology 307 (1), pp. 29 - 42 (2007)

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Journal Article

Scott, E. K.; Mason, L.; Arrenberg, A. B.; Ziv, L.; Gosse, N. J.; Xiao, T.; Chi, N. C.; Asakawa, K.; Kawakami, K.; Baier, H.: Targeting neural circuitry in zebrafish using GAL4 enhancer trapping. Nature Methods 4 (4), pp. 323 - 326 (2007)

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Journal Article

Scott, I. C.; Masri, B.; D'Amico, L. A.; Jin, S. W.; Jungblut, B.; Wehman, A. M.; Baier, H.; Audigier, Y.; Stainier, D. Y. R.: The G protein-coupled receptor Agtrl1b regulates early development of myocardial progenitors. Developmental Cell 12 (3), pp. 403 - 413 (2007)

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Journal Article

Smear, M. C.; Tao, H. Z. W.; Staub, W.; Orger, M. B.; Gosse, N. J.; Liu, Y.; Takahashi, K.; Poo, M. M.; Baier, H.: Vesicular glutamate transport at a central synapse limits the acuity of visual perception in zebrafish. Neuron 53 (1), pp. 65 - 77 (2007)

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Journal Article

Szobota, S.; Gorostiza, P.; Del Bene, F.; Wyart, C.; Fortin, D. L.; Kolstad, K. D.; Tulyathan, O.; Volgraf, M.; Numano, R.; Aaron, H. L. et al.; Scott, E. K.; Kramer, R. H.; Flannery, J.; Baier, H.; Trauner, D.; Isacoff, E. Y.: Remote control of neuronal activity with a light-gated glutamate receptor. Neuron 54 (4), pp. 535 - 545 (2007)

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Journal Article

Wehman, A. M.; Staub, W.; Baier, H.: The anaphase-promoting complex is required in both dividing and quiescent cells during zebrafish development. Developmental Biology 303 (1), pp. 144 - 156 (2007)

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Journal Article

Xiao, T.; Baier, H.: Lamina-specific axonal projections in the zebrafish tectum require the type IV collagen Dragnet. Nature Neuroscience 10 (12), pp. 1529 - 1537 (2007)

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2006

Journal Article

Mumm, J. S.; Williams, P. R.; Godinho, L.; Koerber, A.; Pittman, A. J.; Roeser, T.; Chien, C. B.; Baier, H.; Wong, R. O. L.: In vivo imaging reveals dendritic targeting of laminated afferents by zebrafish retinal ganglion cells. Neuron 52 (4), pp. 609 - 621 (2006)

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2005

Journal Article

Baraban, S. C.; Taylor, M. R.; Castro, P. A.; Baier, H.: Pentylenetetrazole induced changes in zebrafish behavior, neural activity and c-FoS expression. Neuroscience 131 (3), pp. 759 - 768 (2005)

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Journal Article

Beis, D.; Bartman, T.; Jin, S. W.; Scott, I. C.; D'Amico, L. A.; Ober, E. A.; Verkade, H.; Frantsve, J.; Field, H. A.; Wehman, A. et al.; Baier, H.; Tallafuss, A.; Bally-Cuif, L.; Chen, J. N.; Stainier, D. Y. R.; Jungblut, B.: Genetic and cellular analyses of zebrafish atrioventricular cushion and valve development. Development 132 (18), pp. 4193 - 4204 (2005)

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Journal Article

Gahtan, E.; Tanger, P.; Baier, H.: Visual prey capture in larval zebrafish is controlled by identified reticulospinal neurons downstream of the tectum. The Journal of Neuroscience 25 (40), pp. 9294 - 9303 (2005)

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Journal Article

Hua, J. Y.; Smear, M. C.; Baier, H.; Smith, S. J.: Regulation of axon growth in vivo by activity-based competition. Nature 434 (7036), pp. 1022 - 1026 (2005)

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Journal Article

Kay, J. N.; Link, B. A.; Baier, H.: Staggered cell-intrinsic timing of ath5 expression underlies the wave of ganglion cell neurogenesis in the zebrafish retina. Development 132 (11), pp. 2573 - 2585 (2005)

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Journal Article

Muto, A.; Orger, M. B.; Wehman, A. M.; Smear, M. C.; Kay, J. N.; Page-McCaw, P. S.; Gahtan, E.; Xiao, T.; Nevin, L. M.; Gosse, N. J. et al.; Staub, W.; Finger-Baier, K.; Baier, H.: Forward genetic analysis of visual behavior in zebrafish. PLoS Genetics 1 (5), pp. 575 - 588 (2005)

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Publications of Herwig Baier

Journal Article (126)